Zanni Group Papers

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Dunkelberger EB, Woys AM, Zanni MT.  2013.  2D IR Cross Peaks Reveal Hydrogen–Deuterium Exchange with Single Residue Specificity. The Journal of Physical Chemistry B.
Woys AM, Lin Y-S, Reddy AS, Xiong W, De Pablo JJ, Skinner JL, Zanni MT.  2010.  2D IR Line Shapes Probe Ovispirin Peptide Conformation and Depth in Lipid Bilayers. Journal of the American Chemical Society. 132(8):2832-2838. Abstract
Wang L, Middleton CT, Singh S, Reddy AS, Woys AM, Strasfeld DB, Marek P, Raleigh DP, De Pablo JJ, Zanni MT et al..  2011.  2DIR Spectroscopy of Human Amylin Fibrils Reflects Stable β-Sheet Structure. Journal of the American Chemical Society. Abstract
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Xiong W, Laaser JE, Mehlenbacher RD, Zanni MT.  2011.  Adding a dimension to the infrared spectra of interfaces using heterodyne detected 2D sum-frequency generation (HD 2D SFG) spectroscopy. Proceedings of the National Academy of Sciences. 108(52):20902-20907. Abstract
Xiong W, Strasfeld DB, Shim S-H, Zanni MT.  2009.  Automated 2D IR spectrometer mitigates the influence of high optical densities. Vibrational Spectroscopy. 50(1):136-142. Abstract
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Paoprasert P, Laaser JE, Xiong W, Franking RA, Hamers RJ, Zanni MT, Schmidt JR, Gopalan P.  2010.  Bridge-Dependent Interfacial Electron Transfer from Rhenium−Bipyridine Complexes to TiO 2 Nanocrystalline Thin Films. The Journal of Physical Chemistry C. 114(21):9898-9907. Abstract
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Strasfeld DB, Shim S-H, Zanni MT.  2007.  Controlling Vibrational Excitation with Shaped Mid-IR Pulses. Physical Review Letters. 99(3) Abstract
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Dunkelberger EB, Buchanan LE, Marek PJ, Cao P, Raleigh DP, Zanni MT.  2012.  Deamidation accelerates amyloid formation and alters amylin fiber structure. Journal of the American Chemical Society. 134(30):12658-12667. Abstract
Wang L, Middleton CT, Zanni MT, Skinner JL.  2011.  Development and Validation of Transferable Amide I Vibrational Frequency Maps for Peptides. The Journal of Physical Chemistry B. 115(13):3713-3724. Abstract
Krummel AT, Zanni MT.  2006.  DNA Vibrational Coupling Revealed with Two-Dimensional Infrared Spectroscopy:  Insight into Why Vibrational Spectroscopy Is Sensitive to DNA Structure. The Journal of Physical Chemistry B. 110(28):13991-14000. Abstract
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Marek P, Woys AM, Sutton K, Zanni MT, Raleigh DP.  2010.  Efficient Microwave-Assisted Synthesis of Human Islet Amyloid Polypeptide Designed to Facilitate the Specific Incorporation of Labeled Amino Acids. Organic Letters. 12(21):4848-4851. Abstract
Lin Y-S, Shorb JM, Mukherjee P, Zanni MT, Skinner JL.  2009.  Empirical Amide I Vibrational Frequency Map: Application to 2D-IR Line Shapes for Isotope-Edited Membrane Peptide Bundles †. The Journal of Physical Chemistry B. 113(3):592-602. Abstract
Manor J, Feldblum ES, Zanni MT, Arkin IT.  2012.  Environment Polarity in Proteins Mapped Noninvasively by FTIR Spectroscopy. The Journal of Physical Chemistry Letters. 3(7):939-944. Abstract
Krummel AT, Zanni MT.  2008.  Evidence for Coupling between Nitrile Groups Using DNA Templates:  A Promising New Method for Monitoring Structures with Infrared Spectroscopy. The Journal of Physical Chemistry B. 112(5):1336-1338. Abstract
Buchanan LE, Dunkelberger EB, Zanni MT.  2011.  Examining Amyloid Structure and Kinetics with 1D and 2D Infrared Spectroscopy and Isotope Labeling. Protein Folding and Misfolding: Shining Light by Infrared Spectroscopy. 1:217-237.
Laaser JE, Zanni MT.  In Press.  Extracting Structural Information from the Polarization Dependence of One- and Two-Dimensional Sum Frequency Generation Spectra. The Journal of Physical Chemistry A. Abstract
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Grumstrup EM, Shim S-H, Montgomery MA, Damrauer NH, Zanni MT.  2007.  Facile collection of two-dimensional electronic spectra using femtosecond pulse-shaping Technology. Optics Express. 15(25):16681. Abstract
Shim S-H, Strasfeld DB, Fulmer EC, Zanni MT.  2006.  Femtosecond pulse shaping directly in the mid-IR using acousto-optic modulation. Optics Letters. 31(6):838. Abstract
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Manor J, Mukherjee P, Lin Y-S, Leonov H, Skinner JL, Zanni MT, Arkin IT.  2009.  Gating Mechanism of the Influenza A M2 Channel Revealed by 1D and 2D IR Spectroscopies. Structure. 17(2):247-254. Abstract
Shim S-H, Strasfeld DB, Zanni MT.  2006.  Generation and characterization of phase and amplitude shaped femtosecond mid-IR pulses. Optics Express. 14(26):13120. Abstract
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Ding F, Zanni MT.  2007.  Heterodyned 3D IR spectroscopy. Chemical Physics. 341(1-3):95-105. Abstract
Fulmer EC, Ding F, Zanni MT.  2005.  Heterodyned fifth-order 2D-IR spectroscopy of the azide ion in an ionic glass. The Journal of Chemical Physics. 122(3):034302. Abstract
Ding F, Fulmer EC, Zanni MT.  2005.  Heterodyned fifth-order two-dimensional IR spectroscopy: Third-quantum states and polarization selectivity. The Journal of Chemical Physics. 123(9):094502. Abstract
Shim S-H, Zanni MT.  2009.  How to turn your pump–probe instrument into a multidimensional spectrometer: 2D IR and Vis spectroscopies via pulse shaping. Physical Chemistry Chemical Physics. 11(5):748. Abstract
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Krummel AT, Mukherjee P, Zanni MT.  2003.  Inter and Intrastrand Vibrational Coupling in DNA Studied with Heterodyned 2D-IR Spectroscopy. The Journal of Physical Chemistry B. 107(35):9165-9169. Abstract