Zanni Group Papers

Found 91 results
Filters: Author is Zanni, Martin T.  [Clear All Filters]
Zhang TO, Alperstein AM, Zanni M T..  2017.  Amyloid β-Sheet Secondary Structure Identified in UV-Induced Cataracts of Porcine Lenses using 2D IR Spectroscopy. Journal of Molecular Biology.
Kearns NM, Mehlenbacher RD, Jones AC, Zanni M T..  2017.  Broadband 2D electronic spectrometer using white light and pulse shaping: noise and signal evaluation at 1 and 100 kHz. Optics Express. 25(7):7869-7883.
Yano Y, Kondo K, Watanabe Y, Zhang TO, Ho J-J, Oishi S, Fujii N, Zanni M T., Matsuzaki K.  2017.  GXXXG-Mediated Parallel and Antiparallel Dimerization of Transmembrane Helices and Its Inhibition by Cholesterol: Single-Pair FRET and 2D IR Studies. Angewandte.
Kratochvil H.T., Maj M., Matulef K., Annen A.W., Ostmeyer J., Perozo E., Roux B., Valiyaveetil F.I., Zanni M T..  2017.  Probing the effects of gating on the ion occupancy of the K+ channel selectivity filter using 2D IR spectroscopy . Journal of the American Chemical Society.
Wang J, Shea MJ, Flach JT, McDonough TJ, Way AJ, Zanni M T., Arnold MS.  2017.  The Role of Defects as Exciton Quenching Sites in Carbon Nanotube Photovoltaics. Journal of Physical Chemistry C.
Maj M, Lomont JP, Rich KL, Alperstein AM, Zanni M T..  2017.  Site-specific detection of protein secondary structure using 2D IR dihedral indexing: a proposed assembly mechanism of oligomeric hIAPP. Chemical Science.
Schneider SH, Kratochvil H.T., Zanni M T., Boxer SG.  2017.  Solvent Independent Anharmonicity for Carbonyl Oscillators. Journal of Physical Chemistry B.
Kratochvil H.T., Ha D.G., Zanni M.T.  2015.  Counting tagged molecules one by one: Quantitative photoactivation and bleaching of photoactivatable fluorophores. The Journal of Chemical Physics. 143(104201)
Oudenhoven TA, Joo Y, Laaser JE, Gopalan P, Zanni M T..  2015.  Dye aggregation identified by vibrational coupling using 2D IR spectroscopy. The Journal of Chemical Physics. 142(21):212449.
Chan GKL, Witkowski A, Gantz DL, Zhang TO, Zanni MT, Jayaraman S, Cavigiolio G.  2015.  Myeloperoxidase-mediated Methionine Oxidation Promotes an Amyloidogenic Outcome for Apolipoprotein A-I. Journal of Biological Chemistry. 290:10958-10971.
Ding B, Panahi A, Ho J-J, Laaser JE, Brooks, III CE, Zanni M T., Chen Z.  2015.  Probing Site-Specific Structural Information of Peptides at Model Membrane Interface In Situ. Journal of the American Chemical Society. 137(2):10190–10198.
Ho J-J, Skoff DR, Ghosh A, Zanni M T..  2015.  Structural Characterization of Single-Stranded DNA Monolayers Using Two-Dimensional Sum Frequency Generation Spectroscopy. The Journal of Physical Chemistry B. 119(33):10586–10596.
Dunkelberger EB, Grechko M, Zanni M T..  2015.  Transition Dipoles from 1D and 2D Infrared Spectroscopy Help Reveal the Secondary Structures of Proteins: Application to Amyloids. Journal of Physical Chemistry B. 119(44):14065–14075.
Ghosh A, Ho J-J, Serrano AL, Zhang T, Zanni MT.  2015.  Two-dimensional sum-frequency generation (2D SFG) spectroscopy: summary of principles and its application to amyloid fiber monolayers. The Royal Society of Chemistry. 177:493-505.
Serrano AL, Ghosh A, Ostrander JS, Zanni MT.  2015.  Wide-field FTIR microscopy using mid-IR pulse shaping. Optics Express. 13(14):17815-17827.
Ghosh A, Wang J, Moroz YS, Korendovych IV, Zanni M, DeGrado WF, Gai F, Hochstrasser RM.  2014.  2D IR spectroscopy reveals the role of water in the binding of channel-blocking drugs to the influenza M2 channel. The Journal of Chemical Physics. 140(23):235105.
Moran SD, Zhang TO, Zanni MT.  2014.  An alternative structural isoform in amyloid-like aggregates formed from thermally denatured human γD-crystallin. Protein Science. 23(3):321–331.
Grechko M, Ye Y, Mehlenbacher RD, McDonough TJ, Wu M-Y, Jacobberger RM, Arnold MS, Zanni MT.  2014.  Diffusion Assisted Photoexcitation Transfer in Coupled Semiconducting Carbon Nanotube Thin Films. ACS Nano. 8(6):5383–5394.
Laaser JE, Christianson JR, Oudenhoven TA, Joo Y, Gopalan P, Schmidt JR, Zanni MT.  2014.  Dye Self-association Identified by Intermolecular Couplings Between Vibrational Modes as Revealed by Infrared Spectroscopy, and Implications for Electron Injection. The Journal of Physical Chemistry C. 118(11):5854–5861.
Shea MJ, Mehlenbacher RD, Zanni M T., Arnold MS.  2014.  Experimental Measurement of the Binding Configuration and Coverage of Chirality-Sorting Polyfluorenes on Carbon Nanotubes. 5(21):3742–3749.
Peran I, Oudenhoven TA, Woys AM, Watson MD, Zhang TO, Carrico I, Zanni MT, Raleigh DP.  2014.  A General Strategy for the Bio-orthogonal Incorporation of Strongly Absorbing, Solvation Sensitive Infrared Probes into Proteins.. The Journal of Physical Chemistry B. 118(28):7946–7953.
Moran SD, Zanni MT.  2014.  How to Get Insights into Amyloid Structure and Formation from Infrared Spectroscopy. The Journal of Physical Chemistry Letters. (5):1984–1993.
Zhang TO, Buchanan LE, Zanni MT.  2014.  Insights into amylin aggregation by 2D IR spectroscopy. Biomedical Spectroscopy and Imaging. 3(3):189-196.
Buchanan LE, Carr J.K, Fluitt A.M, Hoganson A.J, Moran S.D, de Pablo J.J, Skinner J.L, Zanni M.T.  2014.  Structural motif of polyglutamine amyloid fibrils discerned with mixed-isotope infrared spectroscopy. Proceedings of the National Academy of Sciences. 111(16):5796–5801.
Laaser JE, Skoff DR, Ho J-J, Joo Y, Serrano AL, Steinkruger JD, Gopalan P, Gellman SH, Zanni MT.  2014.  Two-Dimensional Sum-Frequency Generation Reveals Structure and Dynamics of a Surface-Bound Peptide. Journal of the American Chemical Society. 136(3):956-962.
Dunkelberger EB, Woys AM, Zanni MT.  2013.  2D IR Cross Peaks Reveal Hydrogen–Deuterium Exchange with Single Residue Specificity. The Journal of Physical Chemistry B.
Moran SD, Zhang TO, Decatur SM, Zanni MT.  2013.  Amyloid Fiber Formation in Human γD-Crystallin Induced by UV-B Photodamage. Biochemistry. 52(36):6169–6181.
Laaser JE, Zanni MT.  2013.  Extracting Structural Information from the Polarization Dependence of One- and Two-Dimensional Sum Frequency Generation Spectra. The Journal of Physical Chemistry A. 117(29):5875–5890.
Mukherjee SS, Skoff DR, Middleton CT, Zanni MT.  2013.  Fully absorptive 3D IR spectroscopy using a dual mid-infrared pulse shaper. J. Chem. Phys.. 139
Buchanan LE, Dunkelberger EB, Tran H.Q, Cheng P.-N., Chiu C.-C., Cao P., Raleigh D.P, de Pablo J.J, Nowick J.S, Zanni M.T.  2013.  Mechanism of IAPP amyloid fibril formation involves an intermediate with a transient beta-sheet. Proceedings of the National Academy of Sciences. 110(48):19285–19290.
Mehlenbacher RD, Wu M-Y, Grechko M, Laaser JE, Arnold MS, Zanni MT.  2013.  Photoexcitation Dynamics of Coupled Semiconducting Carbon Nanotube Thin Films. Nano Letters. 13(4):1495-1501.
Skoff DR, Laaser JE, Mukherjee SS, Middleton CT, Zanni MT.  2013.  Simplified and economical 2D IR spectrometer design using a dual acousto-optic modulator. Chemical Physics. 422(30):8-15.
Ding B, Laaser JE, Liu Y, Wang P, Zanni MT, Chen Z.  2013.  Site-Specific Orientation of an α-Helical Peptide Ovispirin-1 from Isotope-Labeled SFG Spectroscopy. The Journal of Physical Chemistry B. 117(47):14625-14634.
Woys AM, Mukherjee S, Skoff DR, Moran SD, Zanni MT.  2013.  A Strongly Absorbing Class of Non-Natural Labels for Probing Protein Electrostatics and Solvation with FTIR and 2D IR Spectroscopies. The Journal of Physical Chemistry B. 117(17):5009-5018.
Lam AR, Moran SD, Preketes NK, Zhang TO, Zanni MT, Mukamel S.  2013.  Study of the γD-Crystallin Protein Using Two-Dimensional Infrared (2DIR) Spectroscopy : Experiment and Simulation. The Journal of Physical Chemistry B. :130823100750005.