Zanni Group Papers

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Xiong W, Laaser JE, Paoprasert P, Franking RA, Hamers RJ, Gopalan P, Zanni MT.  2009.  Transient 2D IR Spectroscopy of Charge Injection in Dye-Sensitized Nanocrystalline Thin Films. Journal of the American Chemical Society. 131(50):18040-18041. Abstract
Xiong W, Strasfeld DB, Shim S-H, Zanni MT.  2009.  Automated 2D IR spectrometer mitigates the influence of high optical densities. Vibrational Spectroscopy. 50(1):136-142. Abstract
Xiong W, Laaser JE, Mehlenbacher RD, Zanni MT.  2011.  Adding a dimension to the infrared spectra of interfaces using heterodyne detected 2D sum-frequency generation (HD 2D SFG) spectroscopy. Proceedings of the National Academy of Sciences. 108(52):20902-20907. Abstract
Xiong W, Zanni MT.  2008.  Signal enhancement and background cancellation in collinear two-dimensional spectroscopies. Optics Letters. 33(12):1371. Abstract
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Woys AM, Almeida AM, Wang L, Chiu C-cheng, McGovern M, De Pablo JJ, Skinner JL, Gellman SH, Zanni MT.  2012.  Parallel β-Sheet Vibrational Couplings Revealed by 2D IR Spectroscopy of an Isotopically Labeled Macrocycle: Quantitative Benchmark for the Interpretation of Amyloid and Protein Infrared Spectra. Journal of the American Chemical Society. 134(46):19118-19128. Abstract
Woys AM, Mukherjee S, Skoff DR, Moran SD, Zanni MT.  2013.  A Strongly Absorbing Class of Non-Natural Labels for Probing Protein Electrostatics and Solvation with FTIR and 2D IR Spectroscopies. The Journal of Physical Chemistry B. 117(17):5009-5018. Abstract
Woys AM, Lin Y-S, Reddy AS, Xiong W, De Pablo JJ, Skinner JL, Zanni MT.  2010.  2D IR Line Shapes Probe Ovispirin Peptide Conformation and Depth in Lipid Bilayers. Journal of the American Chemical Society. 132(8):2832-2838. Abstract
Wang L, Middleton CT, Singh S, Reddy AS, Woys AM, Strasfeld DB, Marek P, Raleigh DP, De Pablo JJ, Zanni MT et al..  2011.  2DIR Spectroscopy of Human Amylin Fibrils Reflects Stable β-Sheet Structure. Journal of the American Chemical Society. Abstract
Wang L, Middleton CT, Zanni MT, Skinner JL.  2011.  Development and Validation of Transferable Amide I Vibrational Frequency Maps for Peptides. The Journal of Physical Chemistry B. 115(13):3713-3724. Abstract
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Strasfeld DB, Middleton CT, Zanni MT.  2009.  Mode selectivity with polarization shaping in the mid-IR. New Journal of Physics. 11(10):105046. Abstract
Strasfeld DB, Shim S-H, Zanni MT.  2007.  Controlling Vibrational Excitation with Shaped Mid-IR Pulses. Physical Review Letters. 99(3) Abstract
Strasfeld DB, Shim S-H, Zanni MT.  2009.  New Advances in Mid-IR Pulse Shaping and its Application to 2D IR Spectroscopy and Ground-State Coherent Control. Advances in Chemical Physics. 141:1-28.
Strasfeld DB, Ling YL, Shim S-H, Zanni MT.  2008.  Tracking Fiber Formation in Human Islet Amyloid Polypeptide with Automated 2D-IR Spectroscopy. Journal of the American Chemical Society. 130(21):6698-6699. Abstract
Strasfeld DB, Ling YL, Gupta R, Raleigh DP, Zanni MT.  2009.  Strategies for Extracting Structural Information from 2D IR Spectroscopy of Amyloid: Application to Islet Amyloid Polypeptide. The Journal of Physical Chemistry B. 113(47):15679-15691. Abstract
Skoff DR, Laaser JE, Mukherjee SS, Middleton CT, Zanni MT.  In Press.  Simplified and economical 2D IR spectrometer design using a dual acousto-optic modulator. Chemical Physics.
Shim S-H, Zanni MT.  2009.  How to turn your pump–probe instrument into a multidimensional spectrometer: 2D IR and Vis spectroscopies via pulse shaping. Physical Chemistry Chemical Physics. 11(5):748. Abstract
Shim S-H, Strasfeld DB, Zanni MT.  2006.  Generation and characterization of phase and amplitude shaped femtosecond mid-IR pulses. Optics Express. 14(26):13120. Abstract
Shim S-H, Gupta R, Ling YL, Strasfeld DB, Raleigh DP, Zanni MT.  2009.  Two-dimensional IR spectroscopy and isotope labeling defines the pathway of amyloid formation with residue-specific resolution. Proceedings of the National Academy of Sciences. 106(16):6614-6619. Abstract
Shim S-H, Strasfeld DB, Ling YL, Zanni MT.  2007.  Multidimensional Ultrafast Spectroscopy Special Feature: Automated 2D IR spectroscopy using a mid-IR pulse shaper and application of this technology to the human islet amyloid polypeptide. Proceedings of the National Academy of Sciences. 104(36):14197-14202. Abstract
Shim S-H, Strasfeld DB, Fulmer EC, Zanni MT.  2006.  Femtosecond pulse shaping directly in the mid-IR using acousto-optic modulation. Optics Letters. 31(6):838. Abstract
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Reddy AS, Wang L, Lin Y-S, Ling Y, Chopra M, Zanni MT, Skinner JL, De Pablo JJ.  2010.  Solution Structures of Rat Amylin Peptide: Simulation, Theory, and Experiment. Biophysical Journal. 98(3):443-451. Abstract
Reddy AS, Wang L, Singh S, Ling YL, Buchanan LE, Zanni MT, Skinner JL, De Pablo JJ.  2010.  Stable and Metastable States of Human Amylin in Solution. Biophysical Journal. 99(7):2208-2216. Abstract
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Paoprasert P, Laaser JE, Xiong W, Franking RA, Hamers RJ, Zanni MT, Schmidt JR, Gopalan P.  2010.  Bridge-Dependent Interfacial Electron Transfer from Rhenium−Bipyridine Complexes to TiO 2 Nanocrystalline Thin Films. The Journal of Physical Chemistry C. 114(21):9898-9907. Abstract
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Mukherjee P, Kass I, Arkin IT, Zanni MT.  2006.  Structural Disorder of the CD3ζ Transmembrane Domain Studied with 2D IR Spectroscopy and Molecular Dynamics Simulations. The Journal of Physical Chemistry B. 110(48):24740-24749. Abstract
Mukherjee P, Krummel AT, Fulmer EC, Kass I, Arkin IT, Zanni MT.  2004.  Site-specific vibrational dynamics of the CD3ζ membrane peptide using heterodyned two-dimensional infrared photon echo spectroscopy. The Journal of Chemical Physics. 120(21):10215. Abstract