Zanni Group Papers

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Mukherjee P, Krummel AT, Fulmer EC, Kass I, Arkin IT, Zanni MT.  2004.  Site-specific vibrational dynamics of the CD3ζ membrane peptide using heterodyned two-dimensional infrared photon echo spectroscopy. The Journal of Chemical Physics. 120(21):10215. Abstract
Mukherjee P, Kass I, Arkin IT, Zanni MT.  2006.  Picosecond dynamics of a membrane protein revealed by 2D IR. Proceedings of the National Academy of Sciences. 103(10):3528-3533. Abstract
Mukherjee P, Kass I, Arkin IT, Zanni MT.  2006.  Structural Disorder of the CD3ζ Transmembrane Domain Studied with 2D IR Spectroscopy and Molecular Dynamics Simulations. The Journal of Physical Chemistry B. 110(48):24740-24749. Abstract
Moran SD, Decatur SM, Zanni MT.  2012.  Structural and Sequence Analysis of the Human γD-Crystallin Amyloid Fibril Core Using 2D IR Spectroscopy, Segmental 13 C Labeling, and Mass Spectrometry. Journal of the American Chemical Society. 134(44):18410-18416.
Moran SD, Woys AM, Buchanan LE, Bixby E, Decatur SM, Zanni MT.  2012.  Two-dimensional IR spectroscopy and segmental 13C labeling reveals the domain structure of human  D-crystallin amyloid fibrils. Proceedings of the National Academy of Sciences. 109(9):3329-3334. Abstract
Middleton CT, Strasfeld DB, Zanni MT.  2009.  Polarization shaping in the mid-IR and polarization-based balanced heterodyne detection with application to 2D IR spectroscopy. Optics Express. 17(17):14526. Abstract
Middleton CT, Marek P, Cao P, Chiu C-cheng, Singh S, Woys AM, De Pablo JJ, Raleigh DP, Zanni MT.  2012.  Two-dimensional infrared spectroscopy reveals the complex behaviour of an amyloid fibril inhibitor. Nature Chemistry. 4:355-360. Abstract
Middleton CT, Woys AM, Mukherjee SS, Zanni MT.  2010.  Residue-specific structural kinetics of proteins through the union of isotope labeling, mid-IR pulse shaping, and coherent 2D IR spectroscopy. Methods. 52(1):12-22. Abstract
Middleton CT, Buchanan LE, Dunkelberger EB, Zanni MT.  2011.  Utilizing Lifetimes to Suppress Random Coil Features in 2D IR Spectra of Peptides. The Journal of Physical Chemistry Letters. 2:2357-2361. Abstract
Meng F, Abedini A, Plesner A, Middleton CT, Potter KJ, Zanni MT, Verchere BC, Raleigh DP.  2010.  The Sulfated Triphenyl Methane Derivative Acid Fuchsin Is a Potent Inhibitor of Amyloid Formation by Human Islet Amyloid Polypeptide and Protects against the Toxic Effects of Amyloid Formation. Journal of Molecular Biology. 400(3):555-566. Abstract
Mehlenbacher RD, Wu M-Y, Grechko M, Laaser JE, Arnold MS, Zanni MT.  2013.  Photoexcitation Dynamics of Coupled Semiconducting Carbon Nanotube Thin Films. Nano Letters. 13(4):1495-1501. Abstract
Marek P, Mukherjee S, Zanni MT, Raleigh DP.  2010.  Residue-Specific, Real-Time Characterization of Lag-Phase Species and Fibril Growth During Amyloid Formation: A Combined Fluorescence and IR Study of p-Cyanophenylalanine Analogs of Islet Amyloid Polypeptide. Journal of Molecular Biology. 400(4):878-888. Abstract
Marek P, Woys AM, Sutton K, Zanni MT, Raleigh DP.  2010.  Efficient Microwave-Assisted Synthesis of Human Islet Amyloid Polypeptide Designed to Facilitate the Specific Incorporation of Labeled Amino Acids. Organic Letters. 12(21):4848-4851. Abstract
Manor J, Mukherjee P, Lin Y-S, Leonov H, Skinner JL, Zanni MT, Arkin IT.  2009.  Gating Mechanism of the Influenza A M2 Channel Revealed by 1D and 2D IR Spectroscopies. Structure. 17(2):247-254. Abstract
Manor J, Feldblum ES, Zanni MT, Arkin IT.  2012.  Environment Polarity in Proteins Mapped Noninvasively by FTIR Spectroscopy. The Journal of Physical Chemistry Letters. 3(7):939-944. Abstract